1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00058p00152490

AMTR_s00058p00152490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.124

Description : Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase


Gene families : OG0007653 (Archaeplastida) Phylogenetic Tree(s): OG0007653_tree ,
OG_05_0008304 (LandPlants) Phylogenetic Tree(s): OG_05_0008304_tree ,
OG_06_0009581 (SeedPlants) Phylogenetic Tree(s): OG_06_0009581_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00152490
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT4G27800 TAP38, PPH1 thylakoid-associated phosphatase 38 0.03 Archaeplastida
GSVIVT01038572001 No alias Photosynthesis.photophosphorylation.photosystem... 0.07 Archaeplastida
LOC_Os01g37130.1 No alias photosynthetic acclimation PPH1/TAP38 phosphatase 0.03 Archaeplastida
MA_10427903g0010 No alias Protein phosphatase 2C 57 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_74291g0010 No alias Probable protein phosphatase 2C 5 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Mp6g19810.1 No alias photosynthetic acclimation PPH1/TAP38 phosphatase 0.03 Archaeplastida
Pp3c14_14460V3.1 No alias thylakoid-associated phosphatase 38 0.04 Archaeplastida
Pp3c2_5310V3.1 No alias thylakoid-associated phosphatase 38 0.04 Archaeplastida
Smo233392 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
Solyc03g082960.2.1 No alias photosynthetic acclimation PPH1/TAP38 phosphatase 0.04 Archaeplastida
Zm00001e020739_P001 No alias photosynthetic acclimation PPH1/TAP38 phosphatase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 104 382
No external refs found!