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  5. AMTR_s00058p00182990

AMTR_s00058p00182990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.175

No description available


Gene families : OG0006432 (Archaeplastida) Phylogenetic Tree(s): OG0006432_tree ,
OG_05_0004412 (LandPlants) Phylogenetic Tree(s): OG_05_0004412_tree ,
OG_06_0002716 (SeedPlants) Phylogenetic Tree(s): OG_06_0002716_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00182990
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Gb_09440 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_24119 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_127795g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_141240g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_37806g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_5364g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_60369g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_742499g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_94330g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023343_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!