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  5. AMTR_s00058p00216470

AMTR_s00058p00216470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.233

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000603 (LandPlants) Phylogenetic Tree(s): OG_05_0000603_tree ,
OG_06_0000543 (SeedPlants) Phylogenetic Tree(s): OG_06_0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00216470
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00225230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
Cpa|evm.model.tig00000194.23 No alias No description available 0.01 Archaeplastida
Cre08.g385350 No alias No description available 0.01 Archaeplastida
GSVIVT01007388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01009293001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01009294001 No alias AP2-like ethylene-responsive transcription factor ANT... 0.03 Archaeplastida
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01020066001 No alias External stimuli response.biotic... 0.02 Archaeplastida
GSVIVT01023697001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01025307001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.05 Archaeplastida
Gb_33988 No alias transcription factor (AP2) 0.03 Archaeplastida
Gb_39931 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os01g67410.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os02g40070.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os03g07940.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os03g12950.1 No alias no description available(sp|q84z02|crl5_orysj : 102.0) 0.02 Archaeplastida
LOC_Os03g60430.2 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os05g32270.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os06g43220.1 No alias transcription factor (AP2) 0.05 Archaeplastida
LOC_Os06g44750.1 No alias transcription factor (AP2) 0.02 Archaeplastida
LOC_Os07g03250.1 No alias transcription factor (AP2) 0.03 Archaeplastida
LOC_Os07g39110.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g34360.1 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_196219g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
MA_86195g0010 No alias transcription factor (AP2) 0.04 Archaeplastida
Mp7g13270.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Mp8g11450.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Pp3c10_24550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c15_24980V3.1 No alias AINTEGUMENTA-like 5 0.02 Archaeplastida
Smo419668 No alias No description available 0.02 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.05 Archaeplastida
Solyc03g044300.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc03g123430.4.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Solyc09g007260.4.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g061750.2.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Solyc11g072600.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e005817_P003 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.04 Archaeplastida
Zm00001e011539_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e034197_P002 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e038652_P002 No alias transcription factor (AP2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 114 163
IPR001471 AP2/ERF_dom 206 256
No external refs found!