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  5. AMTR_s00059p00033240

AMTR_s00059p00033240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.15

No description available


Gene families : OG0006793 (Archaeplastida) Phylogenetic Tree(s): OG0006793_tree ,
OG_05_0007987 (LandPlants) Phylogenetic Tree(s): OG_05_0007987_tree ,
OG_06_0007253 (SeedPlants) Phylogenetic Tree(s): OG_06_0007253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00033240
Cluster HCCA: Cluster_232


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019204 obsolete nucleotide phosphatase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007741 Ribosome/NADH_DH 26 76
No external refs found!