AMTR_s00059p00086280 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.61

Description : RNA biosynthesis.RNA polymerase I-dependent transcription.BRP1 transcription initiation factor

Gene families : OG0008331 (Archaeplastida) Phylogenetic Tree(s): OG0008331_tree ,
OG_05_0008492 (LandPlants) Phylogenetic Tree(s): OG_05_0008492_tree ,
OG_06_0007517 (SeedPlants) Phylogenetic Tree(s): OG_06_0007517_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00059p00086280
Cluster	HCCA: Cluster_194

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
MF	GO:0017025	TBP-class protein binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004645	phosphorylase activity	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
MF	GO:0008184	glycogen phosphorylase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016881	acid-amino acid ligase activity	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013150	TFIIB_cyclin	143	209
IPR013150	TFIIB_cyclin	235	305

External Links

No external refs found!