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  5. AMTR_s00060p00096990

AMTR_s00060p00096990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.41

Description : Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000739 (Archaeplastida) Phylogenetic Tree(s): OG0000739_tree ,
OG_05_0000536 (LandPlants) Phylogenetic Tree(s): OG_05_0000536_tree ,
OG_06_0000345 (SeedPlants) Phylogenetic Tree(s): OG_06_0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00096990
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT1G18300 NUDT4, atnudt4 nudix hydrolase homolog 4 0.1 Archaeplastida
AT1G73540 atnudt21, NUDT21 nudix hydrolase homolog 21 0.06 Archaeplastida
GSVIVT01008469001 No alias Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01011668001 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os02g50130.1 No alias Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os06g14420.1 No alias Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os11g32750.1 No alias Nudix hydrolase 13, mitochondrial OS=Arabidopsis... 0.05 Archaeplastida
Solyc03g118470.4.1 No alias Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e015741_P001 No alias Nudix hydrolase 18, mitochondrial OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 20 144
No external refs found!