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  5. AMTR_s00061p00096800

AMTR_s00061p00096800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.73

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00096800
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01025867001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05533 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
MA_293791g0010 No alias Myb family transcription factor PHL7 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e015547_P002 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e033396_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 134 181
IPR001005 SANT/Myb 42 93
No external refs found!