1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00061p00180340

AMTR_s00061p00180340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.196

Description : Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase


Gene families : OG0026513 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011371 (LandPlants) Phylogenetic Tree(s): OG_05_0011371_tree ,
OG_06_0010831 (SeedPlants) Phylogenetic Tree(s): OG_06_0010831_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00180340
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00253480 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016758 transferase activity, transferring hexosyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002213 UDP_glucos_trans 19 65
No external refs found!