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  5. AMTR_s00061p00190500

AMTR_s00061p00190500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.218

No description available


Gene families : OG0002517 (Archaeplastida) Phylogenetic Tree(s): OG0002517_tree ,
OG_05_0001659 (LandPlants) Phylogenetic Tree(s): OG_05_0001659_tree ,
OG_06_0000901 (SeedPlants) Phylogenetic Tree(s): OG_06_0000901_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00190500
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00065900 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00023p00058930 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00028p00157780 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00033p00227350 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00063p00188450 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00103p00134680 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00104p00133950 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 4 54
No external refs found!