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  5. AT1G52990

AT1G52990


Description : thioredoxin family protein


Gene families : OG0005095 (Archaeplastida) Phylogenetic Tree(s): OG0005095_tree ,
OG_05_0003679 (LandPlants) Phylogenetic Tree(s): OG_05_0003679_tree ,
OG_06_0002320 (SeedPlants) Phylogenetic Tree(s): OG_06_0002320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52990
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT1G10000 No alias Ribonuclease H-like superfamily protein 0.05 Archaeplastida
AT2G04420 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0016604 nuclear body IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0051457 maintenance of protein location in nucleus IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 51 172
IPR013766 Thioredoxin_domain 222 310
No external refs found!