1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00062p00089750

AMTR_s00062p00089750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.59

Description : Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00089750
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.03 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT1G62630 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT3G15700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G43740 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01015167001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01077 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12859 No alias Probable disease resistance protein At4g27220... 0.04 Archaeplastida
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.06 Archaeplastida
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.03 Archaeplastida
Gb_18202 No alias Probable disease resistance protein At1g61190... 0.04 Archaeplastida
MA_10322161g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10428204g0010 No alias Probable disease resistance protein At5g63020... 0.04 Archaeplastida
MA_10431079g0020 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10432222g0010 No alias No annotation 0.03 Archaeplastida
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.06 Archaeplastida
MA_168565g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_359444g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_44026g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_502346g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g037540.3.1 No alias Probable disease resistance protein At4g27220... 0.03 Archaeplastida
Solyc06g048910.2.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g007790.1.1 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 100 133
No external refs found!