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  5. AMTR_s00062p00184900

AMTR_s00062p00184900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.182

Description : Cytoskeleton.microfilament network.actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00184900
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G37620 AAc1, ACT1 actin 1 0.02 Archaeplastida
AT3G46520 ACT12 actin-12 0.03 Archaeplastida
AT5G59370 ACT4 actin 4 0.08 Archaeplastida
GSVIVT01026580001 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Gb_22033 No alias actin filament protein 0.02 Archaeplastida
Gb_24792 No alias actin filament protein 0.04 Archaeplastida
Gb_25131 No alias actin filament protein 0.02 Archaeplastida
Gb_29180 No alias actin filament protein 0.02 Archaeplastida
LOC_Os03g50885.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.02 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.03 Archaeplastida
MA_96086g0010 No alias actin filament protein 0.02 Archaeplastida
Mpzg00230.1 No alias actin filament protein 0.02 Archaeplastida
Solyc03g078400.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc05g054480.3.1 No alias actin filament protein 0.05 Archaeplastida
Solyc06g076090.3.1 No alias actin filament protein 0.04 Archaeplastida
Zm00001e004386_P001 No alias actin filament protein 0.04 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.03 Archaeplastida
Zm00001e009080_P001 No alias actin filament protein 0.03 Archaeplastida
Zm00001e012560_P001 No alias actin filament protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!