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  5. AMTR_s00063p00154030

AMTR_s00063p00154030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.45

Description : Nutrient uptake.copper uptake.regulation.bHLH-Ib iron/copper homeostasis regulator


Gene families : OG0003858 (Archaeplastida) Phylogenetic Tree(s): OG0003858_tree ,
OG_05_0002668 (LandPlants) Phylogenetic Tree(s): OG_05_0002668_tree ,
OG_06_0001945 (SeedPlants) Phylogenetic Tree(s): OG_06_0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00154030
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT2G41240 BHLH100 basic helix-loop-helix protein 100 0.02 Archaeplastida
AT3G56970 ORG2, BHLH038 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G56980 ORG3, BHLH039 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G04150 BHLH101 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
LOC_Os01g72370.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
MA_68586g0010 No alias transcription factor (bHLH). iron/copper homeostasis... 0.02 Archaeplastida
MA_716662g0010 No alias No annotation 0.03 Archaeplastida
Solyc10g079650.2.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
Solyc10g079660.3.1 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida
Zm00001e018588_P001 No alias transcription factor (bHLH). iron/copper homeostasis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 63 115
No external refs found!