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  5. AMTR_s00065p00169990

AMTR_s00065p00169990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.136

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL7/L12 component


Gene families : OG0000950 (Archaeplastida) Phylogenetic Tree(s): OG0000950_tree ,
OG_05_0000673 (LandPlants) Phylogenetic Tree(s): OG_05_0000673_tree ,
OG_06_0000509 (SeedPlants) Phylogenetic Tree(s): OG_06_0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00169990
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007737001 No alias No description available 0.03 Archaeplastida
Gb_12915 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.05 Archaeplastida
MA_137800g0010 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida
Mp1g23110.1 No alias component mtRPL7/L12 of large ribosomal subunit proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 97 163
No external refs found!