AMTR_s00065p00208780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.201

No description available


Gene families : OG0001195 (Archaeplastida) Phylogenetic Tree(s): OG0001195_tree ,
OG_05_0000753 (LandPlants) Phylogenetic Tree(s): OG_05_0000753_tree ,
OG_06_0001015 (SeedPlants) Phylogenetic Tree(s): OG_06_0001015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00208780
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT1G13635 No alias DNA glycosylase superfamily protein 0.03 Archaeplastida
GSVIVT01015953001 No alias No description available 0.04 Archaeplastida
GSVIVT01023602001 No alias No description available 0.03 Archaeplastida
LOC_Os01g58550.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g42290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g44050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g38170.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g116880.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g079990.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g010800.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007660_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030438_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041165_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEA Interproscan
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR005019 Adenine_glyco 158 337
No external refs found!