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  5. AMTR_s00066p00019590

AMTR_s00066p00019590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.2

Description : Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD6 component


Gene families : OG0006811 (Archaeplastida) Phylogenetic Tree(s): OG0006811_tree ,
OG_05_0008023 (LandPlants) Phylogenetic Tree(s): OG_05_0008023_tree ,
OG_06_0009668 (SeedPlants) Phylogenetic Tree(s): OG_06_0009668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00019590
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cre12.g502750 No alias Cytoskeleton.actin and tubulin folding.Prefoldin... 0.02 Archaeplastida
Gb_08729 No alias component PFD6 of Prefoldin co-chaperone complex 0.03 Archaeplastida
Mp3g06090.1 No alias component PFD6 of Prefoldin co-chaperone complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
CC GO:0016272 prefoldin complex IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019204 obsolete nucleotide phosphatase activity IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 15 110
No external refs found!