Coexpression cluster: Cluster_129 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 19.79% (37/187) 3.02 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.37% (25/187) 4.03 0.0 0.0
GO:0044444 cytoplasmic part 15.51% (29/187) 3.28 0.0 0.0
GO:0044424 intracellular part 22.99% (43/187) 2.4 0.0 0.0
GO:0003735 structural constituent of ribosome 11.23% (21/187) 3.93 0.0 0.0
GO:0005840 ribosome 10.7% (20/187) 3.9 0.0 0.0
GO:0006412 translation 10.7% (20/187) 3.89 0.0 0.0
GO:0006518 peptide metabolic process 11.23% (21/187) 3.74 0.0 0.0
GO:0005198 structural molecule activity 11.23% (21/187) 3.73 0.0 0.0
GO:0043043 peptide biosynthetic process 10.7% (20/187) 3.85 0.0 0.0
GO:0044464 cell part 23.53% (44/187) 2.18 0.0 0.0
GO:0043604 amide biosynthetic process 10.7% (20/187) 3.73 0.0 0.0
GO:0043603 cellular amide metabolic process 11.23% (21/187) 3.61 0.0 0.0
GO:0043228 non-membrane-bounded organelle 10.7% (20/187) 3.64 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 10.7% (20/187) 3.64 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 12.3% (23/187) 3.2 0.0 0.0
GO:0009059 macromolecule biosynthetic process 12.3% (23/187) 3.07 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 12.83% (24/187) 2.96 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 17.11% (32/187) 2.39 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 11.76% (22/187) 3.02 0.0 0.0
GO:0005575 cellular_component 27.27% (51/187) 1.57 0.0 0.0
GO:0044249 cellular biosynthetic process 14.44% (27/187) 2.46 0.0 0.0
GO:0009987 cellular process 29.41% (55/187) 1.45 0.0 0.0
GO:1901576 organic substance biosynthetic process 14.44% (27/187) 2.38 0.0 0.0
GO:0009058 biosynthetic process 14.97% (28/187) 2.24 0.0 0.0
GO:0043229 intracellular organelle 12.3% (23/187) 2.51 0.0 0.0
GO:0043226 organelle 12.3% (23/187) 2.51 0.0 0.0
GO:0043170 macromolecule metabolic process 21.39% (40/187) 1.55 0.0 0.0
GO:0005622 intracellular 8.02% (15/187) 2.96 0.0 0.0
GO:0006807 nitrogen compound metabolic process 22.46% (42/187) 1.45 0.0 0.0
GO:0044237 cellular metabolic process 22.99% (43/187) 1.42 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 19.25% (36/187) 1.53 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 16.58% (31/187) 1.65 0.0 0.0
GO:0019538 protein metabolic process 16.58% (31/187) 1.65 0.0 0.0
GO:0044267 cellular protein metabolic process 13.9% (26/187) 1.84 0.0 0.0
GO:0070003 threonine-type peptidase activity 2.67% (5/187) 5.12 0.0 3e-06
GO:0005839 proteasome core complex 2.67% (5/187) 5.12 0.0 3e-06
GO:0004298 threonine-type endopeptidase activity 2.67% (5/187) 5.12 0.0 3e-06
GO:0044238 primary metabolic process 22.99% (43/187) 1.14 0.0 6e-06
GO:0071704 organic substance metabolic process 23.53% (44/187) 1.09 1e-06 1.1e-05
GO:0003723 RNA binding 5.88% (11/187) 2.59 3e-06 2.9e-05
GO:0003674 molecular_function 47.59% (89/187) 0.53 2e-05 0.000231
GO:0003676 nucleic acid binding 11.76% (22/187) 1.4 3.4e-05 0.000379
GO:0008150 biological_process 36.36% (68/187) 0.64 3.9e-05 0.000424
GO:0051603 proteolysis involved in cellular protein catabolic process 2.67% (5/187) 3.34 0.000138 0.001452
GO:0008135 translation factor activity, RNA binding 2.14% (4/187) 3.76 0.000213 0.002201
GO:0006413 translational initiation 1.6% (3/187) 4.53 0.000282 0.002853
GO:0008152 metabolic process 26.74% (50/187) 0.69 0.000292 0.002889
GO:0006457 protein folding 2.67% (5/187) 2.99 0.000433 0.004199
GO:0032040 small-subunit processome 1.07% (2/187) 5.61 0.000687 0.006525
GO:0003743 translation initiation factor activity 1.6% (3/187) 4.07 0.000731 0.006553
GO:0016072 rRNA metabolic process 1.6% (3/187) 4.07 0.000731 0.006553
GO:0006364 rRNA processing 1.6% (3/187) 4.07 0.000731 0.006553
GO:0034660 ncRNA metabolic process 2.67% (5/187) 2.77 0.000862 0.007585
GO:0048500 signal recognition particle 1.07% (2/187) 5.38 0.000957 0.007977
GO:0008312 7S RNA binding 1.07% (2/187) 5.38 0.000957 0.007977
GO:0030684 preribosome 1.07% (2/187) 5.38 0.000957 0.007977
GO:0016070 RNA metabolic process 4.28% (8/187) 1.95 0.001204 0.009858
GO:0000049 tRNA binding 1.07% (2/187) 5.19 0.001271 0.01023
GO:0019773 proteasome core complex, alpha-subunit complex 1.07% (2/187) 5.02 0.001626 0.012875
GO:0034728 nucleosome organization 1.07% (2/187) 4.87 0.002024 0.014789
GO:0071824 protein-DNA complex subunit organization 1.07% (2/187) 4.87 0.002024 0.014789
GO:0065004 protein-DNA complex assembly 1.07% (2/187) 4.87 0.002024 0.014789
GO:0006334 nucleosome assembly 1.07% (2/187) 4.87 0.002024 0.014789
GO:0044432 endoplasmic reticulum part 1.6% (3/187) 3.61 0.00191 0.014869
GO:0006139 nucleobase-containing compound metabolic process 5.88% (11/187) 1.46 0.002469 0.016288
GO:0070972 protein localization to endoplasmic reticulum 1.07% (2/187) 4.73 0.002462 0.016473
GO:0006612 protein targeting to membrane 1.07% (2/187) 4.73 0.002462 0.016473
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.07% (2/187) 4.73 0.002462 0.016473
GO:0006613 cotranslational protein targeting to membrane 1.07% (2/187) 4.73 0.002462 0.016473
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.07% (2/187) 4.73 0.002462 0.016473
GO:0045047 protein targeting to ER 1.07% (2/187) 4.73 0.002462 0.016473
GO:0005789 endoplasmic reticulum membrane 1.07% (2/187) 4.61 0.002941 0.01914
GO:1901137 carbohydrate derivative biosynthetic process 2.14% (4/187) 2.73 0.003171 0.020356
GO:0044446 intracellular organelle part 3.74% (7/187) 1.83 0.003817 0.023856
GO:0044422 organelle part 3.74% (7/187) 1.83 0.003817 0.023856
GO:0006506 GPI anchor biosynthetic process 1.07% (2/187) 4.38 0.004019 0.023865
GO:0006497 protein lipidation 1.07% (2/187) 4.38 0.004019 0.023865
GO:0006661 phosphatidylinositol biosynthetic process 1.07% (2/187) 4.38 0.004019 0.023865
GO:0006605 protein targeting 1.07% (2/187) 4.38 0.004019 0.023865
GO:1901135 carbohydrate derivative metabolic process 2.67% (5/187) 2.25 0.004125 0.024188
GO:0046907 intracellular transport 2.14% (4/187) 2.61 0.004331 0.024785
GO:0051649 establishment of localization in cell 2.14% (4/187) 2.61 0.004331 0.024785
GO:0046474 glycerophospholipid biosynthetic process 1.07% (2/187) 4.28 0.004617 0.026107
GO:0072594 establishment of protein localization to organelle 1.07% (2/187) 4.19 0.005253 0.029013
GO:0033365 protein localization to organelle 1.07% (2/187) 4.19 0.005253 0.029013
GO:0097159 organic cyclic compound binding 17.65% (33/187) 0.65 0.006001 0.030984
GO:1901363 heterocyclic compound binding 17.65% (33/187) 0.65 0.005972 0.031173
GO:0046483 heterocycle metabolic process 5.88% (11/187) 1.28 0.006122 0.031268
GO:0072657 protein localization to membrane 1.07% (2/187) 4.1 0.005926 0.031279
GO:0006505 GPI anchor metabolic process 1.07% (2/187) 4.1 0.005926 0.031279
GO:0090150 establishment of protein localization to membrane 1.07% (2/187) 4.1 0.005926 0.031279
GO:0045017 glycerolipid biosynthetic process 1.07% (2/187) 4.1 0.005926 0.031279
GO:0006725 cellular aromatic compound metabolic process 5.88% (11/187) 1.27 0.006257 0.031616
GO:0008484 sulfuric ester hydrolase activity 0.53% (1/187) 7.19 0.006847 0.032521
GO:0008252 nucleotidase activity 0.53% (1/187) 7.19 0.006847 0.032521
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 0.53% (1/187) 7.19 0.006847 0.032521
GO:0008253 5'-nucleotidase activity 0.53% (1/187) 7.19 0.006847 0.032521
GO:0030942 endoplasmic reticulum signal peptide binding 0.53% (1/187) 7.19 0.006847 0.032521
GO:0043933 protein-containing complex subunit organization 1.6% (3/187) 2.94 0.007046 0.033136
GO:0034470 ncRNA processing 1.6% (3/187) 2.97 0.006708 0.033542
GO:0051641 cellular localization 2.14% (4/187) 2.4 0.007215 0.0336
GO:0090407 organophosphate biosynthetic process 2.14% (4/187) 2.38 0.007443 0.033995
GO:0005488 binding 27.27% (51/187) 0.47 0.007375 0.03401
GO:1901360 organic cyclic compound metabolic process 5.88% (11/187) 1.23 0.007656 0.034635
GO:0009247 glycolipid biosynthetic process 1.07% (2/187) 3.87 0.008169 0.035599
GO:0034613 cellular protein localization 1.07% (2/187) 3.87 0.008169 0.035599
GO:0046467 membrane lipid biosynthetic process 1.07% (2/187) 3.87 0.008169 0.035599
GO:0070727 cellular macromolecule localization 1.07% (2/187) 3.87 0.008169 0.035599
GO:0006664 glycolipid metabolic process 1.07% (2/187) 3.67 0.010732 0.046345
GO:0090304 nucleic acid metabolic process 4.28% (8/187) 1.4 0.011619 0.04972
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.048 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_117 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.075 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.039 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_200 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.057 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.039 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_87 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_20 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.038 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_171 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_248 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.044 Archaeplastida Compare
Zea mays HCCA Cluster_86 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_111 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.072 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.047 Archaeplastida Compare
Zea mays HCCA Cluster_348 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.069 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_77 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_55 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_104 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_185 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.059 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_288 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_25 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_473 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.072 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_307 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_93 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_134 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_144 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_178 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_21 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.064 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_104 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_218 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_249 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.041 Archaeplastida Compare
Vitis vinifera HCCA Cluster_41 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_60 0.05 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_87 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_100 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_110 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.044 Archaeplastida Compare
Vitis vinifera HCCA Cluster_219 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.058 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.041 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.029 Archaeplastida Compare
Sequences (187) (download table)

InterPro Domains

GO Terms

Family Terms