1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00066p00045830

AMTR_s00066p00045830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.22

Description : Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica


Gene families : OG0000296 (Archaeplastida) Phylogenetic Tree(s): OG0000296_tree ,
OG_05_0000209 (LandPlants) Phylogenetic Tree(s): OG_05_0000209_tree ,
OG_06_0000451 (SeedPlants) Phylogenetic Tree(s): OG_06_0000451_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00045830
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00249400 evm_27.TU.AmTr_v1... Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00114p00070400 evm_27.TU.AmTr_v1... CEN-like protein 2 OS=Nicotiana tabacum 0.03 Archaeplastida
Zm00001e026057_P001 No alias PEB protein-dependent signalling regulatory protein (PEBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR008914 PEBP 25 161
No external refs found!