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  5. AMTR_s00066p00205980

AMTR_s00066p00205980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.281

Description : Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica


Gene families : OG0001200 (Archaeplastida) Phylogenetic Tree(s): OG0001200_tree ,
OG_05_0001506 (LandPlants) Phylogenetic Tree(s): OG_05_0001506_tree ,
OG_06_0002081 (SeedPlants) Phylogenetic Tree(s): OG_06_0002081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00205980
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020941.45 No alias Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.04 Archaeplastida
Gb_27279 No alias Probable histidine kinase 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_27280 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g15100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo162543 No alias Two-component response regulator ORR41 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 100 208
No external refs found!