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  5. AMTR_s00068p00058140

AMTR_s00068p00058140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00068.24

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00068p00058140
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00156040 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00015p00249640 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00024p00111840 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00026p00106470 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00026p00201250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00047p00187680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00053p00054600 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00062p00072320 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00071p00185000 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00080p00090430 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00109p00088630 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00164p00038360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00164p00051510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 11 44
No external refs found!