AT1G05230 (HDG2)

Aliases : HDG2

Description : homeodomain GLABROUS 2

Gene families : OG0000182 (Archaeplastida) Phylogenetic Tree(s): OG0000182_tree ,
OG_05_0000064 (LandPlants) Phylogenetic Tree(s): OG_05_0000064_tree ,
OG_06_0001739 (SeedPlants) Phylogenetic Tree(s): OG_06_0001739_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G05230
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
AT1G73360	EDT1, HDG11, ATHDG11	homeodomain GLABROUS 11	0.04	Archaeplastida
AT1G79840	GL2	HD-ZIP IV family of homeobox-leucine zipper protein with...	0.02	Archaeplastida
AT2G32370	HDG3	homeodomain GLABROUS 3	0.04	Archaeplastida
GSVIVT01001986001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
GSVIVT01001987001	No alias	Homeobox-leucine zipper protein ROC7 OS=Oryza sativa...	0.02	Archaeplastida
GSVIVT01027508001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.11	Archaeplastida
GSVIVT01035238001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Gb_05082	No alias	transcription factor (HD-ZIP IV)	0.04	Archaeplastida
Gb_18862	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
LOC_Os04g53540.3	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
LOC_Os06g10600.1	No alias	transcription factor (HD-ZIP IV)	0.04	Archaeplastida
LOC_Os08g04190.1	No alias	transcription factor (HD-ZIP IV)	0.04	Archaeplastida
LOC_Os08g08820.2	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
LOC_Os09g35760.1	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
LOC_Os10g42490.1	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
MA_10318273g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
MA_10374232g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
MA_1086446g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_110607g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
MA_122121g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
MA_16767g0010	No alias	transcription factor (HD-ZIP IV)	0.02	Archaeplastida
MA_17048g0010	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
MA_305431g0010	No alias	transcription factor (HD-ZIP IV)	0.02	Archaeplastida
MA_483958g0010	No alias	transcription factor (HD-ZIP IV)	0.04	Archaeplastida
MA_8859629g0010	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
MA_93471g0010	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
Solyc01g091630.3.1	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
Solyc03g098200.4.1	No alias	transcription factor (HD-ZIP IV)	0.07	Archaeplastida
Solyc06g072310.3.1	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
Zm00001e002453_P001	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
Zm00001e006870_P004	No alias	transcription factor (HD-ZIP IV)	0.08	Archaeplastida
Zm00001e015997_P002	No alias	transcription factor (HD-ZIP IV)	0.07	Archaeplastida
Zm00001e017088_P001	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
Zm00001e021649_P002	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Zm00001e023786_P003	No alias	transcription factor (HD-ZIP IV)	0.03	Archaeplastida
Zm00001e034755_P001	No alias	transcription factor (HD-ZIP IV)	0.05	Archaeplastida
Zm00001e036212_P002	No alias	transcription factor (HD-ZIP IV)	0.06	Archaeplastida
Zm00001e039947_P001	No alias	transcription factor (HD-ZIP IV)	0.09	Archaeplastida
Zm00001e041695_P001	No alias	transcription factor (HD-ZIP IV)	0.17	Archaeplastida
Zm00001e042218_P002	No alias	transcription factor (HD-ZIP IV)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010090	trichome morphogenesis	IMP	Interproscan
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045596	negative regulation of cell differentiation	None	Extended
BP	GO:0048497	maintenance of floral organ identity	IGI	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0090700	maintenance of plant organ identity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009812	flavonoid metabolic process	IEP	Neighborhood
BP	GO:0009813	flavonoid biosynthetic process	IEP	Neighborhood
CC	GO:0009897	external side of plasma membrane	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
BP	GO:0010048	vernalization response	IEP	Neighborhood
BP	GO:0010051	xylem and phloem pattern formation	IEP	Neighborhood
BP	GO:0010222	stem vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	Neighborhood
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Neighborhood
MF	GO:0015245	fatty acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015718	monocarboxylic acid transport	IEP	Neighborhood
BP	GO:0015908	fatty acid transport	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
MF	GO:0042803	protein homodimerization activity	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051552	flavone metabolic process	IEP	Neighborhood
BP	GO:0051553	flavone biosynthetic process	IEP	Neighborhood
BP	GO:0051554	flavonol metabolic process	IEP	Neighborhood
BP	GO:0051555	flavonol biosynthetic process	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0080051	cutin transport	IEP	Neighborhood
BP	GO:0080167	response to karrikin	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
CC	GO:0098552	side of membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	65	120
IPR002913	START_lipid-bd_dom	252	465

External Links

No external refs found!

AT1G05230 (HDG2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation