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Aliases : evm_27.TU.AmTr_v1.0_scaffold00069.121
Description : DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana
Gene families : OG0000599 (Archaeplastida) Phylogenetic Tree(s): OG0000599_tree ,
OG_05_0006334 (LandPlants) Phylogenetic Tree(s): OG_05_0006334_tree ,
OG_06_0007963 (SeedPlants) Phylogenetic Tree(s): OG_06_0007963_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00069p00153410 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_24058 | No alias | subunit 1 of Pol IV RNA polymerase | 0.03 | Archaeplastida | |
| MA_10429268g0010 | No alias | subunit 1 of Pol IV RNA polymerase | 0.03 | Archaeplastida | |
| MA_8720349g0010 | No alias | subunit 1 of Pol V RNA polymerase | 0.02 | Archaeplastida | |
| MA_9539211g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Mp7g16790.1 | No alias | subunit 1 of Pol III RNA polymerase | 0.02 | Archaeplastida | |
| Zm00001e025206_P001 | No alias | subunit 1 of Pol V RNA polymerase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0004221 | obsolete ubiquitin thiolesterase activity | IEP | Neighborhood |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Neighborhood |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006006 | glucose metabolic process | IEP | Neighborhood |
| BP | GO:0006094 | gluconeogenesis | IEP | Neighborhood |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Neighborhood |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Neighborhood |
| BP | GO:1901575 | organic substance catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |