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  5. AT1G54520

AT1G54520


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).


Gene families : OG0002653 (Archaeplastida) Phylogenetic Tree(s): OG0002653_tree ,
OG_05_0003539 (LandPlants) Phylogenetic Tree(s): OG_05_0003539_tree ,
OG_06_0006194 (SeedPlants) Phylogenetic Tree(s): OG_06_0006194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54520
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00047550 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01021855001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 Archaeplastida
LOC_Os03g48920.1 No alias FLAP1 non-photochemical quenching regulator protein 0.07 Archaeplastida
MA_10432911g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8953275g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g00940.1 No alias FLAP1 non-photochemical quenching regulator protein 0.02 Archaeplastida
Pp3c26_130V3.1 No alias No annotation 0.04 Archaeplastida
Solyc01g097860.4.1 No alias FLAP1 non-photochemical quenching regulator protein 0.03 Archaeplastida
Zm00001e005335_P001 No alias FLAP1 non-photochemical quenching regulator protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004325 ferrochelatase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005982 starch metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006783 heme biosynthetic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
CC GO:0009526 plastid envelope IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009534 chloroplast thylakoid IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
CC GO:0009941 chloroplast envelope IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010205 photoinhibition IEP Neighborhood
BP GO:0010206 photosystem II repair IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
BP GO:0016119 carotene metabolic process IEP Neighborhood
BP GO:0016120 carotene biosynthetic process IEP Neighborhood
MF GO:0016166 phytoene dehydrogenase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019252 starch biosynthetic process IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0030091 protein repair IEP Neighborhood
BP GO:0031425 chloroplast RNA processing IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0031976 plastid thylakoid IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046246 terpene biosynthetic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0080005 photosystem stoichiometry adjustment IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1905156 negative regulation of photosynthesis IEP Neighborhood
InterPro domains Description Start Stop
IPR010903 DUF1517 209 391
No external refs found!