AMTR_s00071p00121710 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.97

Description : Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.bifunctional hydroxymethylpyrimidine kinase and thiamin-phosphate diphosphorylase (Th1)

Gene families : OG0004633 (Archaeplastida) Phylogenetic Tree(s): OG0004633_tree ,
OG_05_0008297 (LandPlants) Phylogenetic Tree(s): OG_05_0008297_tree ,
OG_06_0010100 (SeedPlants) Phylogenetic Tree(s): OG_06_0010100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00071p00121710
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001221.5 No alias Coenzyme metabolism.thiamine pyrophosphate... 0.01 Archaeplastida
Pp3c1_39340V3.1 No alias thiamin biosynthesis protein, putative 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004789 thiamine-phosphate diphosphorylase activity IEA Interproscan
BP GO:0009228 thiamine biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013749 PM/HMP-P_kinase-1 47 291
No external refs found!