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  5. AT1G05280

AT1G05280


Description : Protein of unknown function (DUF604)


Gene families : OG0000262 (Archaeplastida) Phylogenetic Tree(s): OG0000262_tree ,
OG_05_0000529 (LandPlants) Phylogenetic Tree(s): OG_05_0000529_tree ,
OG_06_0000300 (SeedPlants) Phylogenetic Tree(s): OG_06_0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05280
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019400001 No alias No description available 0.03 Archaeplastida
GSVIVT01019725001 No alias No description available 0.04 Archaeplastida
Gb_12418 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_31866 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g31210.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2039838g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5950g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7477879g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c4_27530V3.1 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
Pp3c9_2080V3.1 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
Smo1345 No alias No description available 0.02 Archaeplastida
Solyc05g046110.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g065390.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g065470.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072700.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g099690.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g099730.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002205_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0016757 transferase activity, transferring glycosyl groups ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0001944 vasculature development IEP Neighborhood
MF GO:0004126 cytidine deaminase activity IEP Neighborhood
MF GO:0004707 MAP kinase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006216 cytidine catabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008460 dTDP-glucose 4,6-dehydratase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009164 nucleoside catabolic process IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
BP GO:0009972 cytidine deamination IEP Neighborhood
BP GO:0009996 negative regulation of cell fate specification IEP Neighborhood
BP GO:0010026 trichome differentiation IEP Neighborhood
BP GO:0010061 regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010062 negative regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010191 mucilage metabolic process IEP Neighborhood
BP GO:0010192 mucilage biosynthetic process IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
BP GO:0010253 UDP-rhamnose biosynthetic process IEP Neighborhood
MF GO:0010280 UDP-L-rhamnose synthase activity IEP Neighborhood
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Neighborhood
MF GO:0010341 gibberellin carboxyl-O-methyltransferase activity IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010454 negative regulation of cell fate commitment IEP Neighborhood
MF GO:0010489 UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity IEP Neighborhood
MF GO:0010490 UDP-4-keto-rhamnose-4-keto-reductase activity IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016618 hydroxypyruvate reductase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0019305 dTDP-rhamnose biosynthetic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0030267 glyoxylate reductase (NADP) activity IEP Neighborhood
BP GO:0033478 UDP-rhamnose metabolic process IEP Neighborhood
BP GO:0034614 cellular response to reactive oxygen species IEP Neighborhood
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Neighborhood
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Neighborhood
BP GO:0042454 ribonucleoside catabolic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042659 regulation of cell fate specification IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0046087 cytidine metabolic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Neighborhood
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Neighborhood
BP GO:0046383 dTDP-rhamnose metabolic process IEP Neighborhood
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Neighborhood
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Neighborhood
MF GO:0050377 UDP-glucose 4,6-dehydratase activity IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051553 flavone biosynthetic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
BP GO:0051555 flavonol biosynthetic process IEP Neighborhood
BP GO:0071369 cellular response to ethylene stimulus IEP Neighborhood
BP GO:0071731 response to nitric oxide IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Neighborhood
MF GO:0080031 methyl salicylate esterase activity IEP Neighborhood
BP GO:0097366 response to bronchodilator IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1902170 cellular response to reactive nitrogen species IEP Neighborhood
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1903889 negative regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1905421 regulation of plant organ morphogenesis IEP Neighborhood
BP GO:1905422 negative regulation of plant organ morphogenesis IEP Neighborhood
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:2000067 regulation of root morphogenesis IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006740 DUF604 207 452
No external refs found!