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  5. AMTR_s00072p00066840

AMTR_s00072p00066840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00072.28

No description available


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00072p00066840
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00155890 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00258360 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00013p00206580 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00025p00129710 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00026p00168780 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00043p00127200 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00056p00087660 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00065p00180680 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00108p00146750 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!