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  5. AMTR_s00075p00134690

AMTR_s00075p00134690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00075.39

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000593 (LandPlants) Phylogenetic Tree(s): OG_05_0000593_tree ,
OG_06_0000328 (SeedPlants) Phylogenetic Tree(s): OG_06_0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00075p00134690
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT2G18670 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01007975001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g50990.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_114175g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_37578g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6697g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_8609304g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc05g018760.3.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008020_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e022538_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 106 151
No external refs found!