AMTR_s00076p00195870 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00076.86

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree ,
OG_06_0009667 (SeedPlants) Phylogenetic Tree(s): OG_06_0009667_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00076p00195870
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AT1G02520	PGP11	P-glycoprotein 11	0.03	Archaeplastida
AT3G28860	ABCB19,...	ATP binding cassette subfamily B19	0.05	Archaeplastida
GSVIVT01009946001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_06993	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.02	Archaeplastida
Gb_10215	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_11202	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_27347	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_32487	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_36497	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_38960	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50100.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g74470.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os04g38570.1	No alias	auxin efflux transporter (ABCB19)	0.04	Archaeplastida
LOC_Os08g05690.1	No alias	subfamily ABCB transporter	0.01	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_111099g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_18863g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.02	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Mp2g02910.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	Archaeplastida
Mp2g06270.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Mp7g04390.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Pp3c17_16450V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Pp3c1_34680V3.1	No alias	P-glycoprotein 10	0.02	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c1_7215V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Smo169182	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo419451	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
Smo92485	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Solyc02g087870.3.1	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e003866_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e006786_P002	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014797_P002	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e017444_P002	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e019933_P001	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.01	Archaeplastida
Zm00001e025438_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e038462_P002	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Zm00001e041008_P003	No alias	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Neighborhood
MF	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004664	prephenate dehydratase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006551	leucine metabolic process	IEP	Neighborhood
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006801	superoxide metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0008649	rRNA methyltransferase activity	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Neighborhood
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Neighborhood
BP	GO:0009098	leucine biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016433	rRNA (adenine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0017056	structural constituent of nuclear pore	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Neighborhood
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1116	1245
IPR003439	ABC_transporter-like	460	585

External Links

No external refs found!

AMTR_s00076p00195870 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation