1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00077p00136900

AMTR_s00077p00136900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.133

Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001977 (SeedPlants) Phylogenetic Tree(s): OG_06_0001977_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00136900
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT3G30540 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
AT4G28320 MAN5, AtMAN5 Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01030165001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.07 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01037215001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
Gb_04261 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426380g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_110162g0010 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 Archaeplastida
MA_894609g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_955078g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Solyc06g150126.1.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Solyc12g013770.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 8 227
No external refs found!