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  5. AMTR_s00077p00176570

AMTR_s00077p00176570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.195

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00176570
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 Archaeplastida
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.04 Archaeplastida
AT5G53290 CRF3 cytokinin response factor 3 0.02 Archaeplastida
GSVIVT01002262001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01020584001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01030515001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
Gb_07476 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_17988 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_166248g0020 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_198113g0010 No alias Ethylene-responsive transcription factor 1A... 0.04 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_27309g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_71018g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g04880.1 No alias Ethylene-responsive transcription factor ERF008... 0.02 Archaeplastida
Mp6g18650.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Pp3c1_27630V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c1_7800V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Smo73155 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e000608_P002 No alias Ethylene-responsive transcription factor ERF073... 0.04 Archaeplastida
Zm00001e017516_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e026192_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 39 87
No external refs found!