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  5. AMTR_s00077p00177420

AMTR_s00077p00177420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.197

Description : Calcium-binding protein CML42 OS=Arabidopsis thaliana


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000085 (LandPlants) Phylogenetic Tree(s): OG_05_0000085_tree ,
OG_06_0001715 (SeedPlants) Phylogenetic Tree(s): OG_06_0001715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00177420
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04330.1 No alias Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os11g04560.1 No alias Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 Archaeplastida
MA_13199g0010 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 Archaeplastida
MA_18054g0010 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
MA_194997g0010 No alias no description available(sp|a0t2m3|polc4_hesar : 130.0) 0.03 Archaeplastida
MA_41536g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g005370.3.1 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.01 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.03 Archaeplastida
Solyc06g150132.1.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011787_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021222_P001 No alias no description available(sp|q93z27|cml46_arath : 105.0) 0.02 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e035870_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 36 65
IPR011992 EF-hand-dom_pair 132 194
No external refs found!