Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.58
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor
Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00078p00085160 | |
Cluster | HCCA: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G01220 | ATHB20, HB20 | homeobox protein 20 | 0.02 | Archaeplastida | |
AT5G66700 | ATHB53, HB53, HB-8 | homeobox 53 | 0.05 | Archaeplastida | |
Gb_07209 | No alias | Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... | 0.04 | Archaeplastida | |
MA_19453g0050 | No alias | Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Pp3c17_18130V3.1 | No alias | homeobox 1 | 0.04 | Archaeplastida | |
Pp3c6_2730V3.1 | No alias | Homeobox-leucine zipper protein family | 0.02 | Archaeplastida | |
Pp3c8_440V3.1 | No alias | homeobox 3 | 0.02 | Archaeplastida | |
Zm00001e007381_P001 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Neighborhood |
MF | GO:0003896 | DNA primase activity | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Neighborhood |
BP | GO:0008219 | cell death | IEP | Neighborhood |
MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
No external refs found! |