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  5. AMTR_s00078p00132750

AMTR_s00078p00132750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.111

Description : Protein modification.phosphorylation.atypical kinase families.TAF kinase


Gene families : OG0002996 (Archaeplastida) Phylogenetic Tree(s): OG0002996_tree ,
OG_05_0003348 (LandPlants) Phylogenetic Tree(s): OG_05_0003348_tree ,
OG_06_0005183 (SeedPlants) Phylogenetic Tree(s): OG_06_0005183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00132750
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AT1G32750 HAF01, HAC13,... HAC13 protein (HAC13) 0.07 Archaeplastida
Cpa|evm.model.tig00020903.20 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Cre10.g425501 No alias Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.02 Archaeplastida
GSVIVT01020528001 No alias Protein modification.phosphorylation.atypical kinase... 0.04 Archaeplastida
LOC_Os06g43790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.04 Archaeplastida
Mp5g22790.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.03 Archaeplastida
Pp3c10_350V3.1 No alias HAC13 protein (HAC13) 0.04 Archaeplastida
Pp3c14_1870V3.1 No alias HAC13 protein (HAC13) 0.03 Archaeplastida
Smo409957 No alias Protein modification.phosphorylation.atypical kinase... 0.06 Archaeplastida
Solyc07g006820.4.1 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.07 Archaeplastida
Zm00001e037464_P001 No alias component HAF/TAF1 of SAGA transcription co-activator... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR009067 TAF_II_230-bd 49 101
IPR022591 TFIID_sub1_DUF3591 963 1359
IPR022591 TFIID_sub1_DUF3591 791 861
IPR001487 Bromodomain 1993 2066
IPR000626 Ubiquitin_dom 879 945
No external refs found!