AMTR_s00078p00145410 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.120

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00078p00145410
Cluster	HCCA: Cluster_270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00128140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT2G37260	WRKY44, TTG2,...	WRKY family transcription factor family protein	0.03	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.04	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	Archaeplastida
GSVIVT01012196001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01022259001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01028823001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01037686001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
LOC_Os01g43550.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g46800.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g47560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os02g16540.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os02g43560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g03900.2	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g09020.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g39720.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os06g06360.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os09g25060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10432362g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_10434651g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_6790522g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_7068293g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_7893884g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c13_10830V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c3_15040V3.1	No alias	WRKY DNA-binding protein 57	0.03	Archaeplastida
Pp3c3_27940V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Pp3c4_26880V3.1	No alias	WRKY DNA-binding protein 57	0.04	Archaeplastida
Solyc01g104550.3.1	No alias	transcription factor (WRKY)	0.07	Archaeplastida
Solyc05g053380.4.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc07g047960.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc12g096350.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e015292_P001	No alias	No annotation	0.06	Archaeplastida
Zm00001e016623_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e019977_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020229_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e020410_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025758_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027702_P001	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e029092_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e032189_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0048037	cofactor binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	108	166

External Links

No external refs found!

AMTR_s00078p00145410 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation