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  5. AMTR_s00078p00160770

AMTR_s00078p00160770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.146

Description : protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002614 (Archaeplastida) Phylogenetic Tree(s): OG0002614_tree ,
OG_05_0002296 (LandPlants) Phylogenetic Tree(s): OG_05_0002296_tree ,
OG_06_0002224 (SeedPlants) Phylogenetic Tree(s): OG_06_0002224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00160770
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT3G18420 No alias Protein prenylyltransferase superfamily protein 0.04 Archaeplastida
AT3G53560 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
GSVIVT01025601001 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_41698 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
MA_10432896g0010 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g008160.4.1 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g005740.3.1 No alias protein SLOW GREEN 1, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
MF GO:0003937 IMP cyclohydrolase activity IEP Neighborhood
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!