AMTR_s00078p00171140 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.162

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0000033 (SeedPlants) Phylogenetic Tree(s): OG_06_0000033_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00078p00171140
Cluster	HCCA: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00032p00016380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	Archaeplastida
AMTR_s00053p00025460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00130p00044000	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00156p00038330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.03	Archaeplastida
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	Archaeplastida
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.05	Archaeplastida
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.05	Archaeplastida
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.03	Archaeplastida
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.03	Archaeplastida
AT2G30590	WRKY21	WRKY DNA-binding protein 21	0.04	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.04	Archaeplastida
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	Archaeplastida
AT3G04670	WRKY39, ATWRKY39	WRKY DNA-binding protein 39	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.06	Archaeplastida
AT5G07100	WRKY26	WRKY DNA-binding protein 26	0.02	Archaeplastida
AT5G41570	ATWRKY24, WRKY24	WRKY DNA-binding protein 24	0.03	Archaeplastida
GSVIVT01001286001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01020864001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01028147001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01032661001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_02625	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_40257	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g09080.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g14440.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g40260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g53260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g60490.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os02g53100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os03g45450.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g46060.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g50920.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os05g39720.1	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
LOC_Os07g02060.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os11g02480.2	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os12g02420.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10426942g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10434450g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10434651g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_11492g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_175750g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_23415g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_381058g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_426605g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_47307g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_54954g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_6790522g0010	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Mp3g17660.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c17_19970V3.1	No alias	WRKY DNA-binding protein 7	0.04	Archaeplastida
Pp3c1_40230V3.1	No alias	WRKY DNA-binding protein 11	0.02	Archaeplastida
Pp3c21_11270V3.1	No alias	WRKY DNA-binding protein 28	0.03	Archaeplastida
Pp3c8_4400V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Solyc01g079260.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc01g079360.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc01g089960.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc04g051690.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc05g007110.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc06g070990.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc07g056280.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc08g081630.2.1	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc10g011910.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e003146_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005219_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e007070_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e018502_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e019977_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e020279_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e023139_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e026554_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e031901_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e032453_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e035859_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006184	obsolete GTP catabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006298	mismatch repair	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	139	197

External Links

No external refs found!

AMTR_s00078p00171140 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation