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  5. AMTR_s00079p00169470

AMTR_s00079p00169470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.82

Description : External stimuli response.gravity.sensing and signalling.ARG1 signalling protein factor


Gene families : OG0001496 (Archaeplastida) Phylogenetic Tree(s): OG0001496_tree ,
OG_05_0001678 (LandPlants) Phylogenetic Tree(s): OG_05_0001678_tree ,
OG_06_0001685 (SeedPlants) Phylogenetic Tree(s): OG_06_0001685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00169470
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Solyc05g009160.3.1 No alias ARG1 gravity signalling protein factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005674 transcription factor TFIIF complex IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 16 78
No external refs found!