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  5. AMTR_s00079p00179880

AMTR_s00079p00179880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.98

No description available


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00179880
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00180800 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G73810 No alias Core-2/I-branching... 0.02 Archaeplastida
AT5G11730 No alias Core-2/I-branching... 0.03 Archaeplastida
AT5G16170 No alias Core-2/I-branching... 0.03 Archaeplastida
GSVIVT01023157001 No alias No description available 0.02 Archaeplastida
LOC_Os12g43880.1 No alias no description available(sp|q65xs5|bc10_orysj : 149.0) 0.02 Archaeplastida
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.03 Archaeplastida
Pp3c10_22140V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c24_4540V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c24_6500V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c2_20630V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 107 334
No external refs found!