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  5. AMTR_s00081p00145720

AMTR_s00081p00145720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00081.56

No description available


Gene families : OG0000441 (Archaeplastida) Phylogenetic Tree(s): OG0000441_tree ,
OG_05_0001584 (LandPlants) Phylogenetic Tree(s): OG_05_0001584_tree ,
OG_06_0001152 (SeedPlants) Phylogenetic Tree(s): OG_06_0001152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00081p00145720
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Gb_06290 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_10283 No alias Dynein 8 kDa light chain, flagellar outer arm... 0.03 Archaeplastida
LOC_Os01g37490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4203g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEA Interproscan
BP GO:0007017 microtubule-based process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 136 198
No external refs found!