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  5. AMTR_s00086p00171610

AMTR_s00086p00171610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.108

Description : Temperature-induced lipocalin-1 OS=Arabidopsis thaliana


Gene families : OG0003111 (Archaeplastida) Phylogenetic Tree(s): OG0003111_tree ,
OG_05_0003519 (LandPlants) Phylogenetic Tree(s): OG_05_0003519_tree ,
OG_06_0003521 (SeedPlants) Phylogenetic Tree(s): OG_06_0003521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00171610
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g39930.1 No alias Temperature-induced lipocalin-1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c18_22450V3.1 No alias temperature-induced lipocalin 0.02 Archaeplastida
Solyc07g005210.3.1 No alias Temperature-induced lipocalin-1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g010320.2.1 No alias Temperature-induced lipocalin-1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 12 150
No external refs found!