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  5. AMTR_s00087p00102660

AMTR_s00087p00102660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00087.34

Description : BURP domain-containing protein BNM2A OS=Brassica napus


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0009094 (SeedPlants) Phylogenetic Tree(s): OG_06_0009094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00087p00102660
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013718001 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035693001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os11g06980.1 No alias BURP domain-containing protein 17 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Mp6g16190.1 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc03g114240.4.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 82 146
IPR004873 BURP_dom 170 265
No external refs found!