AMTR_s00089p00116340 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.65

Description : RNA biosynthesis.transcriptional activation.WRKY transcription factor

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000250 (LandPlants) Phylogenetic Tree(s): OG_05_0000250_tree ,
OG_06_0002801 (SeedPlants) Phylogenetic Tree(s): OG_06_0002801_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00089p00116340
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00201830	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00077p00103880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AMTR_s00078p00123870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
AT5G52830	ATWRKY27, WRKY27	WRKY DNA-binding protein 27	0.04	Archaeplastida
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01019419001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01036223001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
Gb_01527	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Gb_31953	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_40207	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Gb_40261	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g09100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g43650.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g46800.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g21950.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os04g51560.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os05g04640.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os05g49100.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10425932g0020	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10436051g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_11351g0010	No alias	transcription factor (WRKY). serine carboxypeptidase	0.03	Archaeplastida
MA_52928g0010	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_7068293g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_74833g0010	No alias	transcription factor (WRKY)	0.05	Archaeplastida
MA_912980g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_91468g0010	No alias	transcription factor (WRKY)	0.06	Archaeplastida
Pp3c13_10830V3.1	No alias	WRKY family transcription factor	0.02	Archaeplastida
Pp3c2_2510V3.1	No alias	WRKY DNA-binding protein 11	0.02	Archaeplastida
Pp3c3_27940V3.1	No alias	WRKY DNA-binding protein 2	0.02	Archaeplastida
Solyc02g080890.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc04g056360.4.1	No alias	No annotation	0.04	Archaeplastida
Solyc07g065260.4.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	414	472
IPR003657	WRKY_dom	199	256

External Links

No external refs found!

AMTR_s00089p00116340 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation