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  5. AT1G05490

AT1G05490 (chr31)


Aliases : chr31

Description : chromatin remodeling 31


Gene families : OG0000450 (Archaeplastida) Phylogenetic Tree(s): OG0000450_tree ,
OG_05_0000597 (LandPlants) Phylogenetic Tree(s): OG_05_0000597_tree ,
OG_06_0000338 (SeedPlants) Phylogenetic Tree(s): OG_06_0000338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05490
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00081110 No alias RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein 0.04 Archaeplastida
AT2G21455 No alias No description available 0.04 Archaeplastida
GSVIVT01013277001 No alias RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein 0.05 Archaeplastida
Pp3c2_3510V3.1 No alias SNF2 domain-containing protein / helicase... 0.02 Archaeplastida
Solyc01g068297.1.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.06 Archaeplastida
Solyc01g068320.3.1 No alias RDR2-polymerase regulator protein CLSY3/4 0.06 Archaeplastida
Solyc08g061390.3.1 No alias SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002237 response to molecule of bacterial origin IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0008360 regulation of cell shape IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
BP GO:0009553 embryo sac development IEP Neighborhood
BP GO:0009624 response to nematode IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009908 flower development IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
CC GO:0010169 thioglucosidase complex IEP Neighborhood
MF GO:0010180 thioglucosidase binding IEP Neighborhood
BP GO:0010234 anther wall tapetum cell fate specification IEP Neighborhood
BP GO:0010268 brassinosteroid homeostasis IEP Neighborhood
BP GO:0010430 fatty acid omega-oxidation IEP Neighborhood
BP GO:0010866 regulation of triglyceride biosynthetic process IEP Neighborhood
BP GO:0010867 positive regulation of triglyceride biosynthetic process IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016595 glutamate binding IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031221 arabinan metabolic process IEP Neighborhood
BP GO:0031222 arabinan catabolic process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0034196 acylglycerol transport IEP Neighborhood
BP GO:0034197 triglyceride transport IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Neighborhood
BP GO:0045834 positive regulation of lipid metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0046593 mandelonitrile lyase activity IEP Neighborhood
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0048317 seed morphogenesis IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048608 reproductive structure development IEP Neighborhood
BP GO:0048827 phyllome development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0080051 cutin transport IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0080172 petal epidermis patterning IEP Neighborhood
BP GO:0090207 regulation of triglyceride metabolic process IEP Neighborhood
BP GO:0090208 positive regulation of triglyceride metabolic process IEP Neighborhood
BP GO:0090567 reproductive shoot system development IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000330 SNF2_N 848 1149
IPR001650 Helicase_C 1209 1318
No external refs found!