1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00092p00089090

AMTR_s00092p00089090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.49

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL37a component


Gene families : OG0001934 (Archaeplastida) Phylogenetic Tree(s): OG0001934_tree ,
OG_05_0002267 (LandPlants) Phylogenetic Tree(s): OG_05_0002267_tree ,
OG_06_0003026 (SeedPlants) Phylogenetic Tree(s): OG_06_0003026_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00089090
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT3G60245 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000718.64 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
MA_320643g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g08340.1 No alias component RPL37a of LSU proteome component 0.03 Archaeplastida
Pp3c11_2550V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Pp3c1_1530V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Pp3c2_34770V3.1 No alias Zinc-binding ribosomal protein family protein 0.03 Archaeplastida
Pp3c3_1620V3.1 No alias Zinc-binding ribosomal protein family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002674 Ribosomal_L37ae 2 91
No external refs found!