AMTR_s00093p00102680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00093.33

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26c component


Gene families : OG0009062 (Archaeplastida) Phylogenetic Tree(s): OG0009062_tree ,
OG_05_0010023 (LandPlants) Phylogenetic Tree(s): OG_05_0010023_tree ,
OG_06_0012655 (SeedPlants) Phylogenetic Tree(s): OG_06_0012655_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00093p00102680
Cluster HCCA: Cluster_196


Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
CC GO:0030904 retromer complex IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004828 serine-tRNA ligase activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006434 seryl-tRNA aminoacylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0044183 protein binding involved in protein folding IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!