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  5. AMTR_s00095p00169830

AMTR_s00095p00169830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.148

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional ASD-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0002921 (Archaeplastida) Phylogenetic Tree(s): OG0002921_tree ,
OG_05_0002414 (LandPlants) Phylogenetic Tree(s): OG_05_0002414_tree ,
OG_06_0001806 (SeedPlants) Phylogenetic Tree(s): OG_06_0001806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00169830
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g03530.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Pp3c6_10310V3.1 No alias alpha-L-arabinofuranosidase 1 0.03 Archaeplastida
Smo267967 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
Zm00001e001505_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e020852_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0046373 L-arabinose metabolic process IEA Interproscan
MF GO:0046556 alpha-L-arabinofuranosidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR010720 Alpha-L-AF_C 497 662
No external refs found!