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  5. AMTR_s00098p00114560

AMTR_s00098p00114560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00098.29

No description available


Gene families : OG0007141 (Archaeplastida) Phylogenetic Tree(s): OG0007141_tree ,
OG_05_0005124 (LandPlants) Phylogenetic Tree(s): OG_05_0005124_tree ,
OG_06_0003271 (SeedPlants) Phylogenetic Tree(s): OG_06_0003271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00114560
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G05291 No alias Protein of unknown function (DUF1218) 0.04 Archaeplastida
AT1G11500 No alias Protein of unknown function (DUF1218) 0.09 Archaeplastida
AT2G32280 No alias Protein of unknown function (DUF1218) 0.03 Archaeplastida
AT4G21310 No alias Protein of unknown function (DUF1218) 0.07 Archaeplastida
GSVIVT01030648001 No alias No description available 0.11 Archaeplastida
Gb_03050 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34358 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g36110.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10427997g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g052910.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021775_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035182_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
InterPro domains Description Start Stop
IPR009606 DUF1218 58 147
No external refs found!