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  5. AMTR_s00098p00153370

AMTR_s00098p00153370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00098.42

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase


Gene families : OG0000278 (Archaeplastida) Phylogenetic Tree(s): OG0000278_tree ,
OG_05_0001466 (LandPlants) Phylogenetic Tree(s): OG_05_0001466_tree ,
OG_06_0006687 (SeedPlants) Phylogenetic Tree(s): OG_06_0006687_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00098p00153370
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00154460 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.05 Archaeplastida
GSVIVT01019605001 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
GSVIVT01026922001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_02987 No alias Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_23608 No alias beta amylase 0.02 Archaeplastida
Gb_23609 No alias beta amylase 0.02 Archaeplastida
Gb_28692 No alias beta amylase 0.02 Archaeplastida
LOC_Os10g41550.1 No alias beta amylase 0.03 Archaeplastida
Solyc01g067660.3.1 No alias beta amylase 0.02 Archaeplastida
Zm00001e002383_P001 No alias beta amylase 0.02 Archaeplastida
Zm00001e035797_P003 No alias beta amylase 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 2 278
No external refs found!