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  5. AMTR_s00099p00128180

AMTR_s00099p00128180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.113

Description : B2 protein OS=Daucus carota


Gene families : OG0000238 (Archaeplastida) Phylogenetic Tree(s): OG0000238_tree ,
OG_05_0000581 (LandPlants) Phylogenetic Tree(s): OG_05_0000581_tree ,
OG_06_0001388 (SeedPlants) Phylogenetic Tree(s): OG_06_0001388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00128180
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.03 Archaeplastida
Gb_10275 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 97.4) 0.03 Archaeplastida
LOC_Os05g07220.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.03 Archaeplastida
LOC_Os05g51590.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.03 Archaeplastida
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.03 Archaeplastida
MA_184449g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.04 Archaeplastida
Mp6g13060.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 261.0) 0.02 Archaeplastida
Pp3c16_23790V3.1 No alias DCD (Development and Cell Death) domain protein 0.02 Archaeplastida
Pp3c26_13910V3.1 No alias DCD (Development and Cell Death) domain protein 0.02 Archaeplastida
Solyc06g050610.3.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.03 Archaeplastida
Solyc10g076330.3.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.04 Archaeplastida
Zm00001e011644_P004 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 267.0) 0.01 Archaeplastida
Zm00001e020733_P001 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 Archaeplastida
Zm00001e031085_P001 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 113.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0042555 MCM complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 101 229
No external refs found!