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  5. AMTR_s00099p00142540

AMTR_s00099p00142540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.130

Description : Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component


Gene families : OG0001356 (Archaeplastida) Phylogenetic Tree(s): OG0001356_tree ,
OG_05_0001187 (LandPlants) Phylogenetic Tree(s): OG_05_0001187_tree ,
OG_06_0002043 (SeedPlants) Phylogenetic Tree(s): OG_06_0002043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00142540
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
MA_425966g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_15650V3.1 No alias CLP protease regulatory subunit X 0.02 Archaeplastida
Pp3c1_40090V3.1 No alias CLP protease regulatory subunit X 0.02 Archaeplastida
Solyc01g102990.3.1 No alias chaperone component ClpX of mitochondrion Clp-type... 0.02 Archaeplastida
Zm00001e014150_P002 No alias chaperone component ClpX of mitochondrion Clp-type... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 564 634
No external refs found!